Protocols

All (1474)Explore Protocol Graph

189 protocols

experimentalstandardized

Artificial nectar robbing

A method to experimentally add nectar rewards to naturally pollen-only rewarding flowers by depositing measured volumes of artificial nectar solution onto flower structures accessible to pollinators. ...

resource manipulation44 papersmicro-pipettes, artificial nectar solution...
experimentalstandardized

pollination exclusion experiment

Experimental addition of outcross pollen to flowers to test whether natural pollination limits plant reproductive success, comparing reproductive output between hand-pollinated and naturally pollinate...

pollen limitation test36 paperscamel hair paintbrush, forceps...
experimentalstandardized

common garden experiment (Brassicaceae)

A large-scale reciprocal transplant experiment across five elevational gardens with factorial snow and temperature manipulations to test local adaptation and evolutionary rescue potential under climat...

climate adaptation34 papersOpen-top chambers, Snow removal tools...
experimentalstandardized

Experimental predator manipulation with colony establishment

Controlled experiment manipulating predator presence by establishing artificial aphid colonies, protecting them from natural predators, then adding lygus bugs to treatment plants. Includes ant bridge ...

predation experiment29 papersrandom number generator, paint brush...
experimentalstandardized

Factorial environmental stress experiment (Limnephilidae)

2x2 factorial design manipulating temperature and conductivity to test environmental drying cues on caddisfly development and survival. Uses shade manipulation and salt additions to simulate pond dryi...

environmental physiology29 papersshade cloth, NaCl solution...
experimentalstandardized

Snowmelt manipulation using shade cloths

Shade cloths suspended 3m above treatment plots accelerate snowmelt by 5-7 days when snowpack reaches ~1m depth, simulating earlier spring snowmelt conditions. Cloths removed after complete treatment ...

climate manipulation22 papersshade cloths, 3m rebar stakes...
experimentalstandardized

Burying beetle habitat reproduction experiment (Silphidae)

Field experiment comparing reproductive success of burying beetle species across habitat types using breeding pairs, mouse carcasses, and environmental monitoring. Measures burial success, development...

behavioral ecology20 paperstemperature sensors, soil moisture sensors...
experimentalstandardized

Microcosm predator avoidance bioassay

Controlled experimental system using circular plastic tanks to test mayfly larval responses to chemical cues by measuring foraging behavior on substrate surfaces before and after treatment application...

behavioral19 paperscircular aerated plastic tanks, stream water supply system...
experimentalstandardized

Open-top chamber warming

A 2×2 factorial experiment combining passive warming using open-top chambers with dominant plant species removal across elevational gradients at multiple global mountain sites to test interactive effe...

climate manipulation19 paperstransparent hexagonal open-top chambers (OTCs), iButtons (Thermochron & Hygrochron ibuttons, Maxim Integrated Corp., San Jose, CA, USA)...
experimentalstandardized

Grasshopper feeding bioassay for plant defense

Choice feeding trials where individual grasshoppers are offered leaves from different plant treatments to measure relative herbivory rates. Herbivory is quantified by measuring leaf area consumed usin...

herbivory measurement18 papersarenas, Gothic Research Center...
experimentalstandardized

Split-plot snowmelt and precipitation manipulation experiment

A factorial field experiment manipulating snowmelt timing using black shade cloth and summer precipitation using rainout shelters in a split-plot design to simulate climate change effects.

climate manipulation18 papersblack shade cloth, rainout shelter...
experimentalstandardized

Y-tube olfactometer assay

Controlled choice experiments measuring butterfly oviposition preference between plant species using matched plant materials in screen cages. Preference quantified as proportion of eggs laid on test p...

behavioral18 papers0.23 × 0.23 × 0.23 m screen cages, 10-cm-square pots...
experimentalstandardized

Infrared heating manipulation

Infrared heaters suspended above experimental plots to simulate warming effects on montane vegetation communities across moisture gradients. Heating power adjusted over time to maintain consistent war...

climate warming16 papersinfrared heaters, infrared heating lamps
experimentalstandardized

reciprocal transplant experiment

Multi-site common garden experiment using controlled crosses to partition genetic and environmental variance in vegetative and floral traits across a hybrid zone. Seeds from multiple genetic families ...

quantitative genetics16 papersshade-cloth canopy, fencing materials...
experimentalstandardized

Ant exclusion experiment on aphid colonies

Experimental manipulation using physical barriers to exclude ants from aphid colonies while maintaining control colonies with ant access. Uses paired treatment design on same plants to test effects of...

mutualism manipulation14 papersTanglefoot Company Grand Rapids Michigan, parafilm SPI Supplies West Chester Pennsylvania...
experimentalstandardized

RMBL warming experiment

29-year experimental warming using overhead infrared radiators to increase soil temperature by 2°C in subalpine grassland plots. Heat flux of 22 W/m² applied continuously from 1991-2019.

climate manipulation14 papersoverhead infrared radiators
experimentalstandardized

Factorial field experiment

Factorial experiment crossing nitrogen addition treatments with dominant species removal treatments in replicated plots to test community responses to multiple global change drivers. Includes both sel...

community manipulation13 papersplot markers, urea...
experimentalstandardized

Road dust impact on floral longevity experiment

Paired experimental design comparing floral development and longevity between plants receiving daily road dust applications versus undusted controls, with detailed tracking of flower developmental sta...

pollination ecology13 paperscoins, flags...
experimentalstandardized

rainout shelter

Experimental manipulation of summer precipitation levels (doubled, halved, ambient) to assess effects on plant physiological and fitness traits in a common garden setting over multiple years.

climate manipulation13 papersprecipitation manipulation system, leaf area measurement tools...
experimentalstandardized

Long-term nitrogen manipulation experiment with plant community monitoring

A controlled field experiment testing the effects of nitrogen addition and reduction on plant community composition over 8 years. Annual percent cover monitoring tracked responses of invasive and nati...

nutrient manipulation12 papersnitrogen amendment materials, percent cover estimation methods...
experimentalstandardized

Leaf pack decomposition assay

Controlled microcosm experiments measuring invertebrate-mediated breakdown of sedge detritus by quantifying mass loss of coarse and fine particulate organic matter over time. Uses standardized biomass...

decomposition measurement11 papersplastic bins, 1 mm mesh...
experimentalstandardized

Helianthella flower removal experiment (Asteraceae)

Experimental removal of flower buds to simulate frost damage effects, allowing comparison of microclimate conditions between plots with and without flower displays in subalpine meadow.

phenological manipulation9 papersmeasuring tape, plot markers...
experimentalstandardized

Nutrient Diffusing Substrates (NDS)

Factorial experimental design using artificial stream channels to test temperature and nutrient effects on algae growth. Solar heating systems create temperature gradients while drip systems deliver c...

environmental manipulation8 papersvinyl rain gutters, ½ horsepower irrigation pump...
experimentalstandardized

Tiger salamander feeding preference mesocosm trials (Ambystomatidae)

Controlled feeding trials in plastic mesocosms where starved salamanders are presented with multiple prey types and their consumption and foraging behavior is observed and quantified over a fixed time...

feeding behavior8 papers52 cm × 36.5 cm plastic boxes, observation recording materials...
experimentalstandardized

Artificial flower UV exposure selection experiment

Controlled experiment using artificial flowers with discrete bullseye phenotypes exposed to UV-present vs UV-absent treatments to test UV-mediated selection on floral traits. Pollen viability measured...

controlled selection7 papersGrowth chambers, Full-spectrum UV lighting...
experimentalstandardized

Audio playback experiment

Controlled playback experiments using modified alarm calls to test receiver behavioral responses to different acoustic features including added noise and nonlinear phenomena.

behavioral response7 papershidden speakers, Omalene 300 Purina horse feed...
experimentalstandardized

Factorial drought and nutrient stress experiment (Brassicaceae)

Greenhouse factorial experiment manipulating water availability (3 levels) and nutrient supply (2 levels) to test resource limitation effects on fitness components. Plants grown from field-collected s...

controlled environment manipulation7 papersgreenhouse benches, misting system...
experimentalstandardized

Reciprocal egg-transfer experiment for bee larval survival (Megachilidae)

Laboratory experiment transferring bee eggs between different pollen provision types to test effects on larval survival. Eggs moved between Taraxacum and native Asteraceae provisions in a balanced rec...

controlled manipulation7 papersscalpel, microsurgical instruments...
experimentalstandardized

soil incubation (Asteraceae)

Factorial greenhouse experiment testing effects of soil inoculum source and sterilization on alpine grass growth, traits, and fungal colonization. Plants grown in standardized sand-inoculum mixtures w...

plant-microbe associations7 papers~150 mL plastic root trainer pots, QUIKRETE Play Sand...
experimentalstandardized

Behavioral discrimination experiments for individual recognition (Sciuridae)

Controlled experiments testing marmots' ability to distinguish between individuals using acoustic and olfactory cues to assess recognition capabilities within social groups.

behavioral6 papersacoustic playback equipment, olfactory testing apparatus
experimentalstandardized

Leaf pack method

Standard litterbag method deployed across elevation gradient to study litter decomposition rates and microbial succession. Involves placing known masses of litter in mesh bags and retrieving over time...

decomposition study6 papersmesh bags, analytical balance...
experimental

focal animal sampling (Cervidae)

Controlled experiment using feeding stations paired with predator scent cues to test antipredator behavioral responses. Individual feeding times are recorded to quantify vigilance behavior in response...

behavioral ecology6 papersPurina Mills feed blocks, Petri dishes...
experimentalstandardized

CNS elemental analysis (Limnephilidae)

Short-term incubation of caddisfly larvae in filtered pond water to measure nitrogen and phosphorus excretion rates under ambient conditions. Five larvae per species were incubated for one hour in sha...

metabolic rate assessment5 papersZiploc bags, syringe...
experimental

Elevational fungal transplant experiment (Poaceae)

A controlled field experiment transplanting grass species across elevational gradients with manipulated fungal soil communities to test effects of plant-fungi mismatches on plant performance during cl...

transplant manipulation5 papersplots, pots...
experimentalstandardized

Factorial phenology-water manipulation of potted wildflowers

A factorial experiment manipulating both flowering phenology (by moving plants between elevations) and water availability (through differential watering regimes) using potted native plants in field ar...

climate manipulation5 papers2-gallon plastic pots, mesh shade-shelter...
experimentalstandardized

Macroinvertebrate nutrient excretion incubation

Organisms are incubated in filtered pond water for one hour to measure nitrogen and phosphorus excretion rates through water chemistry analysis before and after incubation.

biogeochemical measurement5 papersbags, water filters...
experimentalstandardized

Multiple-choice feeding preference assay (Limnephilidae)

Larvae offered multiple food choices in aquatic containers with instantaneous behavioral sampling over extended time periods to quantify feeding preferences.

behavioral ecology5 papersplastic containers, paper clips...
experimentalstandardized

open-field test (Sciuridae)

Standardized 4-minute test immediately following open field test where a mirror is revealed to measure sociability and aggressive responses toward conspecific image, recorded via overhead camera.

behavioral assay5 papersmirror covering far wall, GoPro Hero camera...
experimentalstandardized

quantitative genetic evolutionary model (Pieridae)

Transplant butterflies between high and low elevation sites to quantify differences in flight initiation timing and thermal sensitivity across elevation gradients using caged trials.

physiological performance5 papersSeeVue window screen, bridal veil...
experimentalstandardized

Clipping herbivory simulation

Experimental clipping treatment designed to reduce plant photosynthetic capacity by approximately 50% through removal of stems. Used to simulate herbivory stress and examine effects on mycorrhizal ass...

stress manipulation4 papersclippers, paper towels...
experimental

Floral orientation manipulation for fitness measurement (Plantae)

Experimental manipulation of natural floral orientations combined with pollen supplementation to test effects on seed set and female fitness.

reproductive4 papersbent and looped metal wire, pollen collection tools
experimentalstandardized

Flow-through channel mesocosm experiment

Artificial stream channels with controlled flow regimes and nutrient treatments to test effects of phosphorus availability on D. geminata growth and bloom formation.

controlled environment4 paperswhite plastic rain gutters, ceramic tiles...
experimentalstandardized

Live-trap docility assessment (Sciuridae)

Live-trapping of marmots to assess docility through standardized behavioral responses during capture and handling, including alarm calling propensity in trap situations.

behavioral assessment4 papersTomahawk single door live traps, canvas handling bags...
experimental

Parasitoid wasp controlled exposure on bagged flowers (Asteraceae)

Flowers are bagged to prevent natural parasitism, then exposed to controlled introductions of parasitoid wasps or ambient parasitoid activity, followed by assessment of parasitism effects on seed pred...

behavioral manipulation4 papersGPS, bags...
experimental

Puzzle box innovation testing (Sciuridae)

Deployment of novel puzzle boxes with multiple solution pathways to test problem-solving ability and innovation in wild animals. Video recorded trials allow detailed behavioral analysis of problem-sol...

cognitive assessment4 paperspuzzle boxes, horse feed...
experimental

Reciprocal transplant germination experiment

Field experiment testing seed germination of different genotypes/treatments in natural microhabitats of related species to assess niche requirements and differentiation.

niche differentiation4 paperscolored plastic toothpicks, water-soluble glue...
experimentalstandardized

factorial experiment (Ranunculaceae)

Controlled factorial experiment manipulating both water availability and pollen supplementation to test for interactive effects on plant reproduction.

resource manipulation4 papersSprayMate Storm 2.5-Gallon 18V Battery Powered Sprayer, 15 L plastic backpack sprayer...
experimental

song playback experiment (Passeridae)

Systematic presentation of conspecific, heterospecific competitor, and control songs to territorial males followed by standardized behavioral observation and scoring. Uses randomized treatment order w...

behavioral4 papersSennheise MZW 816 microphone, Marantz solid-state PMD660 recorder...
experimental

Ant chemical associative learning field assay (Formicidae)

A two-phase field protocol using training baits scented with plant chemicals followed by two-choice tests to assess whether ants form associative memories linking plant odors to carbohydrate rewards. ...

behavioral conditioning3 papersbamboo sticks, sugar water baits...
experimentalstandardized

Butterfly-mediated microbial dispersal experiment (Nymphalidae)

Controlled experiment using marker bacterium to track microbial transfer from inoculated donor flowers to recipient flowers via butterfly foraging behavior.

microbial transmission3 papersfloral picks, micropipette...