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Protocols

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30 protocols

experimentalstandardized

Experimental predator manipulation with colony establishment

Controlled experiment manipulating predator presence by establishing artificial aphid colonies, protecting them from natural predators, then adding lygus bugs to treatment plants. Includes ant bridge ...

predation experiment29 papersrandom number generator, paint brush...
samplingstandardized

pitfall trapping (Formicidae)

Standardized 2-hour baiting experiments using 5 different resource types arranged in pentagonal plots to sample ant communities and assess dominance patterns. Records ant abundance and identity at reg...

community sampling29 papersplastic discs (6 cm diameter), canned tuna in water...
experimentalstandardized

Ant exclusion experiment on aphid colonies

Experimental manipulation using physical barriers to exclude ants from aphid colonies while maintaining control colonies with ant access. Uses paired treatment design on same plants to test effects of...

mutualism manipulation14 papersTanglefoot Company Grand Rapids Michigan, parafilm SPI Supplies West Chester Pennsylvania...
measurementstandardized

Cariveau allometric conversion (Apidae)

Field capture of wild bumblebees followed by temporary immobilization through cold-induced chill coma to enable precise measurement of tongue length and body size. Individuals are released unharmed af...

morphometric9 papersinsect net, labeled vials...
observational

Visual and camera trap survey of small mammals

Combined direct visual observation during peak activity periods with motion-activated camera bucket traps to determine species presence/absence in meadow habitats. Camera traps used small entry holes ...

wildlife monitoring7 papersbinoculars, GPS unit...
sampling

focal animal sampling

Standardized pellet count method for estimating deer density using systematic transect surveys with random placement. Identifies scat to species level where possible to distinguish herbivore types usi...

wildlife density estimation7 papersmeasuring tape, random number generator...
experimental

focal animal sampling (Cervidae)

Controlled experiment using feeding stations paired with predator scent cues to test antipredator behavioral responses. Individual feeding times are recorded to quantify vigilance behavior in response...

behavioral ecology6 papersPurina Mills feed blocks, Petri dishes...
sampling

mark-recapture (Cricetidae)

Standard live-trapping protocol using Longworth traps in grid arrays for mark-recapture population estimation of small mammals with individual marking and release.

demographic monitoring6 papersLongworth live-traps, oats...
measurementstandardized

jar method

Standardized wet sieving method using Yoder device to determine soil aggregate size distributions. Measures water-stable aggregates across multiple size classes to assess soil structure.

physical5 papersDickson apparatus, Yoder device...
sampling

camera trap survey

Camera traps deployed along trails in a stratified random design to detect wildlife presence and estimate occupancy while accounting for detection probability. Cameras moved weekly within zones to sam...

wildlife monitoring4 papersBrowning Strike Force Model BTC-5HDPX camera traps, SD cards...
measurementstandardized

quadrat sampling (Asteraceae)

Plant cover measured using 1 m² quadrats divided into 1 dm² cells, counting filled cells to nearest 0.25 dm². Height measured to maximum plant extension. Volume calculated as cover × height/10.

morphometric4 papers1 m² quadrat divided into 1 dm² cells, string spaced every 10 cm...
experimental

Ant chemical associative learning field assay (Formicidae)

A two-phase field protocol using training baits scented with plant chemicals followed by two-choice tests to assess whether ants form associative memories linking plant odors to carbohydrate rewards. ...

behavioral conditioning3 papersbamboo sticks, sugar water baits...
computational

GIS-based meadow habitat mapping for ground squirrels

Used raster analysis in ArcGIS to identify suitable ground squirrel habitat by combining landcover and canopy height data, then calculated distance-from-cover metrics using buffer operations. This met...

habitat modeling3 papersArcGIS, RMBL 1m resolution Basic Landcover Map...
laboratory

Gravimetric soil moisture determination

Standardized method using funnel, filter paper and drainage to measure maximum water holding capacity of soil samples. Involves saturating soil, draining for set time, then oven-drying to calculate wa...

soil analysis3 papersBUNN brand coffee filters, 100 mL conical funnel...
experimentalstandardized

Snow melt manipulation experiment (Aphididae)

Experimental advancement of snow melt timing using shade cloth application to test effects on host plant phenology and aphid-plant interactions. Combined with temperature manipulation using open-top w...

climate manipulation3 papersPVC poles, EasyShade 50% Black Bulk Shade Cloth UV Resistant...
analytical

nonmetric multidimensional scaling (Plantae)

PERMANOVA testing of volatile composition differences across species and years, with NMDS visualization of chemical dissimilarity patterns.

multivariate statistics3 papersR-Studio, Vegan Package
sampling

scat transect surveys (Cervidae)

Systematic collection and GPS mapping of predator scats along established trail networks to quantify spatial patterns of predator activity relative to human disturbance. Scat density is calculated per...

spatial ecology3 papersGPS unit, collection containers
analytical

AIC model selection (Plantae)

Multiple candidate models incorporating different combinations of climate predictors were fitted and ranked using Akaike Information Criterion to select optimal models for demographic functions.

statistical modeling2 papersStatistical modeling software
observational

Ant identification and behavioral observation on sunflowers (Asteraceae)

Field-based study of ant interactions with pollinators on Helianthella quinquenervis, involving ant identification and behavioral observations. Protocol development included ant keying skills and hone...

behavioral ecology2 papersidentification keys, honey...
experimental

Colony fragmentation and diet manipulation of Formica podzolica (Formicidae)

Wild ant colonies were collected and split into paired fragments, then maintained on controlled diets (carbohydrate vs protein-rich) to test effects of macronutrient balance on behavior. Colony fragme...

behavioral manipulation2 papers15-litre plastic containers, 19-litre plastic buckets...
analyticalstandardized

Honeydew collection and chemical analysis

Collection of aphid honeydew on aluminum foil substrates followed by LC-MS/MS analysis to quantify sugar and amino acid composition as indicators of plant quality and ant-aphid mutualism benefits.

biochemical2 papersaluminum foil squares, stereoscope...
sampling

Multi-year arthropod community surveys on dioecious plants

Exhaustive visual surveys of arthropod abundance on randomly selected male and female plants conducted across multiple years to quantify sex-biased community structure.

community monitoring2 papersvisual identification, visual counting
analytical

Plant biomass allocation analysis (Valerianaceae)

Calculation and statistical analysis of plant biomass allocation between vegetative and reproductive tissues using arcsin transformations and three-way ANOVA.

resource allocation assessment2 papersanalytical tools, scales...
samplingstandardized

Sagebrush arthropod visual encounter surveys

Visual counting method for arthropods on sagebrush plants involving systematic counting of mobile species first (to avoid double-counting) followed by sedentary species. Targets mutualistic and non-mu...

arthropod monitoring2 papers1 m² quadrat frames, counting sheets...
observational

Trophic interaction field observation

Systematic field observation of trophic interactions between organisms, primarily plants and insects, with rotating temporal sampling across multiple sites to record feeding relationships and interact...

behavioral observation2 papers
computational

Climate wetness index calculation

Calculation of site-specific wetness indices using mean annual precipitation and temperature data to characterize local climate conditions for experimental sites.

environmental characterization1 paperClimate databases, GIS software
experimental

clay caterpillar predation bioassay

Artificial prey made from green modeling clay are deployed on tree branches to estimate bird attack rates over a standardized time period. Attack marks on clay allow identification of predator type an...

predation assay1 paperClay extruder (Walnut Hollow), Green nontoxic modeling clay (Sargent Art)...
observational

eBird citizen science protocol

Use existing citizen science bird observation data from eBird database to characterize bird abundance and diversity patterns across environmental gradients. Data is filtered for quality and geographic...

community survey1 papereBird database, R package Elevatr (Hollister et al., 2021)...
analytical

stable isotope analysis

Carbon and nitrogen stable isotope analysis of ant tissues to determine trophic position and dietary composition. Involves specimen preparation, drying, grinding, and mass spectrometry analysis.

molecular1 paperdrying oven, grinding equipment...
analytical

Dominance scoring (Formicidae)

Three dominance scores calculated for each species at each site where it occurred to assess competitive hierarchies.

0 papers