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Protocols

All (1474)Explore Protocol Graph

18 protocols

experimentalstandardized

common garden experiment (Brassicaceae)

A large-scale reciprocal transplant experiment across five elevational gardens with factorial snow and temperature manipulations to test local adaptation and evolutionary rescue potential under climat...

climate adaptation34 papersOpen-top chambers, Snow removal tools...
measurementstandardized

browse damage assessment

Twice weekly censuses recording plant vital status, reproductive phenology, and fitness components including flower and fruit production. Weekly assessments of herbivore damage quantify leaf area remo...

demographic monitoring31 paperscalipers, measuring tape...
experimentalstandardized

Open-top chamber warming

A 2×2 factorial experiment combining passive warming using open-top chambers with dominant plant species removal across elevational gradients at multiple global mountain sites to test interactive effe...

climate manipulation19 paperstransparent hexagonal open-top chambers (OTCs), iButtons (Thermochron & Hygrochron ibuttons, Maxim Integrated Corp., San Jose, CA, USA)...
experimentalstandardized

Infrared heating manipulation

Infrared heaters suspended above experimental plots to simulate warming effects on montane vegetation communities across moisture gradients. Heating power adjusted over time to maintain consistent war...

climate warming16 papersinfrared heaters, infrared heating lamps
experimentalstandardized

RMBL warming experiment

29-year experimental warming using overhead infrared radiators to increase soil temperature by 2°C in subalpine grassland plots. Heat flux of 22 W/m² applied continuously from 1991-2019.

climate manipulation14 papersoverhead infrared radiators
experimentalstandardized

rainout shelter

Experimental manipulation of summer precipitation levels (doubled, halved, ambient) to assess effects on plant physiological and fitness traits in a common garden setting over multiple years.

climate manipulation13 papersprecipitation manipulation system, leaf area measurement tools...
experimentalstandardized

Leaf pack decomposition assay

Controlled microcosm experiments measuring invertebrate-mediated breakdown of sedge detritus by quantifying mass loss of coarse and fine particulate organic matter over time. Uses standardized biomass...

decomposition measurement11 papersplastic bins, 1 mm mesh...
analyticalstandardized

Carbon isotope discrimination analysis

Measurement of water-use efficiency differences between plant sexes using leaf carbon isotope ratios (δ13C) to understand mechanistic basis of sex-specific climate responses.

physiological measurement10 paperswater potential measurement device, stomatal conductance measurement device...
computationalstandardized

MaxEnt SAR theory

Application of METE mathematical framework to predict species-area relationships and species-abundance distributions based on community state variables and entropy maximization principles.

macroecological modeling9 papersPython programming environment, mathematical computation software...
measurementstandardized

SPAD chlorophyll measurement

Measurement of chlorophyll fluorescence using LI-600 to assess photosynthetic efficiency by quantifying light emission from chlorophyll molecules excited by solar radiation.

plant physiology9 papersLI-600
measurementstandardized

Nondestructive plant size measurement for biomass prediction (Asteraceae)

Systematic measurement of plant morphological characteristics (leaf number, leaf area, stalk count, etc.) before plant extraction to develop predictive relationships with total plant biomass. Differen...

morphometric8 papersmeasurement tools for length and area
experimentalstandardized

Factorial drought and nutrient stress experiment (Brassicaceae)

Greenhouse factorial experiment manipulating water availability (3 levels) and nutrient supply (2 levels) to test resource limitation effects on fitness components. Plants grown from field-collected s...

controlled environment manipulation7 papersgreenhouse benches, misting system...
analyticalstandardized

Principal Component Analysis (Brassicaceae)

Genomic sequencing and demographic modeling using GADMA2 to estimate historical gene flow patterns and migration rates between populations across elevational gradients.

genomic7 papersIllumina NextSeq 500 platform, GADMA2 software
analyticalstandardized

HPLC glucosinolate analysis

Extraction and quantification of desulfated glucosinolates from plant leaves using high-performance liquid chromatography with diode array and charged aerosol detection. Follows established desulfatio...

chemical analysis6 papersscrew-cap microcentrifuge tubes, 70% MeOH...
analytical

community-weighted mean

Multivariate analysis technique to quantify community responses over time. Treatment weights indicate response magnitude and species weights show individual taxa responses.

multivariate statistics5 papers
samplingstandardized

destructive biomass sampling

Complete excavation of plants followed by separation into above-ground, below-ground, and reproductive components, with subsequent drying and weighing to determine biomass allocation patterns.

biomass measurement5 papersexcavation tools, drying oven...
observational

Elevation gradient flower color polymorphism survey (Brassicaceae)

Systematic assessment of flower color variation across environmental gradients using standardized color categories and plot-based sampling. Combines phenotypic scoring with environmental variable meas...

phenotypic variation monitoring4 papersmeasuring tape, color categorization guide...
experimentalstandardized

QTL mapping (Brassicaceae)

Multi-environment QTL analysis using recombinant inbred lines tested across vernalization, photoperiod and temperature treatments to identify genomic regions controlling flowering time. Combines contr...

genetic mapping2 papersgrowth chambers, Petri dishes...