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8 results — topic: genome

Dataset

Genome-resolved metagenomics and metatranscriptomics of microbial communities in three meander-bound floodplain soils along the East River, Colorado.

This dataset comprises paired environmental and genomic data for soil samples collected across meander-bound floodplains G (ERMG), L (ERML) and Z (ERMZ). A total of 96 soil samples (32 per floodplain) from the ~ 10-25 cm layer were collected in September 2015, during base flow conditions. An additio

Matheus Carnevali P, Hobson C, Geller-McGrath D2021DOI: 10.15485/1631979Cited 1 times
Dataset

Genome-resolved metagenomics and metatranscriptomics of microbial communities in three meander-bound floodplain soils along the East River, Colorado.

This dataset comprises paired environmental and genomic data for soil samples collected across meander-bound floodplains G (ERMG), L (ERML) and Z (ERMZ). A total of 96 soil samples (32 per floodplain) from the ~ 10-25 cm layer were collected in September 2015, during base flow conditions. An additio

Matheus Carnevali P, Hobson C, Geller-McGrath D2021DOI: 10.15485/1631979Cited 1 times
Dataset

Sage-Grouse de novo assembly

De novo assembly of the Gunnison Sage-Grouse using CLC Genomics Workbench. Includes CLC assembly report.

Card, Daren C., Schield, Drew R., Reyes-Velasco, Jacobo2014DOI: 10.5061/dryad.qn1n2/1
Dataset

Sage-Grouse 1x reference-guided genome

1x consensus Sage-Grouse genome from reference-guided assembly using the Chicken genome as reference. Assembly statistics report is included.

Card, Daren C., Schield, Drew R., Reyes-Velasco, Jacobo2014DOI: 10.5061/dryad.qn1n2/5
Dataset

Sage-Grouse to Chicken chromosome annotation

Chromsome annotation of the Sage-Grouse using the Chicken genome. Used 1x reference-guided assembly and blast, and assumed high synteny between species.

Card, Daren C., Schield, Drew R., Reyes-Velasco, Jacobo2014DOI: 10.5061/dryad.qn1n2/3
Dataset

Sage-Grouse 2x reference-guided genome

2x consensus Sage-Grouse genome from reference-guided assembly using the Chicken genome as reference. Assembly statistics report is included.

Card, Daren C., Schield, Drew R., Reyes-Velasco, Jacobo2014DOI: 10.5061/dryad.qn1n2/6
Dataset

Sage-Grouse mitochondrial assembly and MITOS annotation

Reference-guided assembly of the Sage-Grouse mitochondrion using consensus Galliformes mitochondrial sequence as guide. Includes MITOS annotation.

Card, Daren C., Schield, Drew R., Reyes-Velasco, Jacobo2014DOI: 10.5061/dryad.qn1n2/8
Dataset

Sage-Grouse 5x reference-guided genome

5x consensus Sage-Grouse genome from reference-guided assembly using the Chicken genome as reference. Assembly statistics report is included.

Card, Daren C., Schield, Drew R., Reyes-Velasco, Jacobo2014DOI: 10.5061/dryad.qn1n2/7