548 results — topic: Genetics & Evolution

Dataset

Metagenome-assembled genomes measured at 3 depths during snowmelt period in East River, CO (March, May, and June, September 2017)

Snowmelt is a critical biogeochemical period that accounts for large nitrogen (N) export events from high-elevation watersheds. Soil microbial populations bloom and immobilize N during snowmelt, yet the population size crashes in spring, which releases a pulse of soil N. We sought to discover the N

Ulas Karaoz, Patrick O. Sorensen, Jillian F. Banfield2025DOI: 10.15485/2569158Cited 1 times
Dataset

Metagenome-assembled genomes from topsoils along a hillslope water gradient across early snowmelt to late summer in East River, CO

Drought is changing the American Mountain West at unprecedented rates with unknown consequences to soil microbiome composition and function. As a part of LBNL Watershed Science Focus Area (SFA), we investigated shifts in microbial community and transcriptional activity on a subalpine conifer-meadow

Preston Tasoff, Ulas Karaoz, Jillian F. Banfield2025DOI: 10.15485/2571194
Dataset

Metagenome-assembled genomes from East River floodplain sediments near Crested Butte, CO, USA (May to September 2018)

Microorganisms play a key role in cycling nutrients and contaminants in the terrestrial environment depending on their genetic potential. Here, we present metagenome-assembled genomes (MAGs) for the bacterial and archaeal community in floodplain sediment samples taken in 2018 in May (flooded conditi

Anna Rasmussen, Cam Anderson, Marco Keiluweit2025DOI: 10.15485/2997559
Dataset

Metagenome-assembled genomes from East River floodplain sediments near Crested Butte, CO, USA (June to September 2017)

Microorganisms play a key role in cycling nutrients and contaminants in the terrestrial environment depending on their genetic potential. Here, we present metagenome-assembled genomes (MAGs) for the bacterial and archaeal community in floodplain sediment samples taken in 2017 in June (flooded condit

Anna Rasmussen, Cam Anderson, Marco Keiluweit2025DOI: 10.15485/2997557
Dataset

Metagenome-assembled genomes from East River floodplain sediments near Crested Butte, CO, USA (June to September 2019)

Microorganisms play a key role in cycling nutrients and contaminants in the terrestrial environment depending on their genetic potential. Here, we present metagenome-assembled genomes (MAGs) for the bacterial and archaeal community in floodplain sediment samples taken in 2019 in June (flooded condit

Anna Rasmussen, Cam Anderson, Marco Keiluweit2025DOI: 10.15485/2997556
Dataset

Metagenome-assembled genomes from topsoils collected during NEON campaign in East River, CO (06/14/2018-06/28/2018)

The Watershed Function Science Focus Area (WF SFA) at Lawrence Berkeley National Lab is working to build a mechanistic understanding of the distribution and dynamics of biogeochemical processes in mountainous watersheds and their response to perturbation. In June 2018, the NEON (National Ecological

Ulas Karaoz, Patrick Sorensen, Dana Chadwick2025DOI: 10.15485/2587101
Article

Sex-specific reproductive strategies in wild yellow-bellied marmots (<i> Marmota flaviventer </i>): senescence and genetic variance in annual reproductive success differ between the sexes

Owing to sex-specific reproductive strategies, the mean and variance in annual offspring production may differ between the sexes. In addition, there may be sex-specific changes in reproductive performance with age (e.g. senescence). We used 20 and 50 years of longitudinal data on male and female yel

St. Lawrence S., Dumas M. N., Petelle M. B.2022Behavioral Ecology and SociobiologyDOI: 10.1007/s00265-022-03191-9Cited 9 times
Article

Integrating natural gradients, experiments, and statistical modeling in a distributed network experiment: An example from the WaRM Network

A growing body of work examines the direct and indirect effects of climate change on ecosystems, typically by using manipulative experiments at a single site or performing meta-analyses across many independent experiments. However, results from single-site studies tend to have limited generality. Al

Prager C. M., Classen A. T., Sundqvist M. K.2022Ecology and EvolutionDOI: 10.1002/ece3.9396Cited 17 times
Article

Hibernation slows epigenetic ageing in yellow-bellied marmots

Abstract Species that hibernate live longer than would be expected based solely on their body size. Hibernation is characterized by long periods of metabolic suppression (torpor) interspersed by short periods of increased metabolism (arousal). The torpor-arousal cycles occur multiple times during hi

Pinho G. M., Martin J., Farrell C.2022Nature Ecology & EvolutionDOI: 10.21203/rs.3.rs-526409/v1Cited 6 times
Article

Evolution and genomic basis of the plant penetrating ovipositor: a key morphological trait in herbivorous Drosophilidae

Herbivorous insects are extraordinarily diverse, yet are found in only one-third of insect orders. This skew may result from barriers to plant colonization, coupled with phylogenetic constraint on plant-colonizing adaptations. The plant-penetrating ovipositor, however, is one trait that surmounts ho

Peláez J. N., Gloss A. D., Ray J. F.2022Proceedings of the Royal Society BDOI: 10.1098/rspb.2022.1938Cited 13 times
Article

The Evolution and Ecology of Interactions Between Ants and Honeydew-Producing Hemipteran Insects

The interactions between ants and certain sap-feeding insects in the order Hemiptera are classic examples of food-for-protection mutualisms. In these associations, herbivorous hemipterans use a highly specialized, straw-like mouthpart to consume sap directly from plant phloem and xylem and, as a res

Nelson A. S., Mooney K. A.2022The Annual Review of Ecology, Evolution, and SystematicsDOI: 10.1146/annurev-ecolsys-102220-014840Cited 62 times
Article

Legume germination is delayed in dry soils and in sterile soils devoid of microbial mutualists: Species-specific implications for upward range expansions

Climate change is affecting species and their mutualists and can lead to the weakening or loss of important interspecific interactions. Through independent shifts in partner phenology and distribution, climatic stress can separate mutualists temporally or spatially, leading to alterations in partner

Keeler A. M., Rafferty N. E.2022Ecology and EvolutionDOI: 10.1002/ece3.9186Cited 11 times
Article

An analytical pipeline to support robust research on the ecology, evolution, and function of floral volatiles

Research on floral volatiles has grown substantially in the last 20 years, which has generated insights into their diversity and prevalence. These studies have paved the way for new research that explores the evolutionary origins and ecological consequences of different types of variation in floral

Eisen K. E., Powers J. M., Raguso R. A.2022Frontiers in Ecology and EvolutionDOI: 10.3389/fevo.2022.1006416Cited 17 times
Article

Genetic and spatial variation in vegetative and floral traits across a hybrid zone

AbstractPremiseGenetic variation influences the potential for evolution to rescue populations from impacts of environmental change. Most studies of genetic variation in fitness‐related traits focus on either vegetative or floral traits, with few on floral scent. How vegetative and floral traits comp

Campbell D. R., Raguso R. A., Midzik M.2022American Journal of BotanyDOI: 10.1002/ajb2.16067Cited 11 times
Article

Habitat selection in a fluctuating ground squirrel population: Density - dependence and fitness consequences

Investigating individual-based habitat settlement decisions is a central theme in ecology, yet studies that quantify density-dependent habitat selection or tie fitness to resource selection decisions remain rare. We quantified habitat selection in golden-mantled ground squirrels ( Callospermophilus

Aliperti J. R., Jenderseck K., Van Vuren D. H.2022Ecology and EvolutionDOI: 10.1002/ece3.9241Cited 5 times
Article

Borgs are giant genetic elements with potential to expand metabolic capacity

Anaerobic methane oxidation exerts a key control on greenhouse gas emissions 1 , yet factors that modulate the activity of microorganisms performing this function remain poorly understood. Here we discovered extraordinarily large, diverse DNA sequences that primarily encode hypothetical proteins thr

Al-Shayeb B., Schoelmerich M. C., West-Roberts J.2022NatureDOI: 10.1038/s41586-022-05256-1Cited 69 times
Thesis

Relationships matter: How the social environment affects individual fitness-related behaviors

Individuals respond to predators through an array of anti-predator behaviors that can be influenced by their social environment, specifically through protection from predators or by altering risk-resource trade-offs through competitive exclusion from resources. While social effects like group size a

Williams D. M.2021
Article

A hybrid data-model approach to map soil thickness in mountain hillslopes

Abstract. Soil thickness plays a central role in the interactions between vegetation, soils, and topography, where it controls the retention and release of water, carbon, nitrogen, and metals. However, mapping soil thickness, here defined as the mobile regolith layer, at high spatial resolution rema

Yan Q., Wainwright H. M., Dafflon B.2021Earth Surface DynamicsDOI: 10.5194/esurf-9-1347-2021Cited 23 times
Article

Cold adaptation drives population genomic divergence in the ecological specialist, <i> Drosophila montana </i>

Wiberg R. A. W., Tyukmaeva V., Hoikkala A.2021Molecular Ecology