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Protocols

All (1474)Explore Protocol Graph

17 protocols

measurementstandardized

Specific Leaf Area (SLA)

Comprehensive measurement of vegetative traits including specific leaf area, trichome density, water use efficiency, and percent water content from field-collected leaves using scanning, drying, weigh...

morphological and physiological27 paperscoin envelopes, cooler...
measurementstandardized

5TE soil sensor monitoring

Continuous automated monitoring of soil temperature, moisture, and gas concentrations at multiple depths using sensor arrays. Provides high-resolution temporal data on soil microenvironmental conditio...

environmental15 papersVWC EC-5 Meter Group Pullman WA sensors, matric potential kPa Teros 21 sensors...
measurementstandardized

HOBO sensor environmental monitoring

Continuous collection of local weather data at 5-minute intervals throughout growing seasons to capture fine-scale environmental variation affecting disease dynamics.

environmental monitoring15 papershigh-resolution weather stations, data processing software
measurementstandardized

reflectance spectrophotometry

Standardized measurement of floral reflectance spectra using fiber optic probe positioned at fixed distance and angle from flower surface. Spectra collected across 300-700 nm range for input into visu...

optical11 papersAvantes model 2048 spectrometer, bifurcated coaxial fiber optic reflectance probe (Avantes FCR-7uv200-2-ME)...
measurementstandardized

Li-Cor 6400 photosynthesis measurement

A novel approach to measure light response curves for entire plant communities rather than individual plants using tent-based gas exchange measurements across multiple light levels. This method contro...

physiological10 papersLI-Cor 7500 infrared gas analyzer, tent system...
measurementstandardized

Beaver pond habitat characterization

Multi-parameter assessment of beaver pond physical characteristics including area, depth, flow velocity, and beaver activity indicators to control for habitat differences in community analyses.

habitat assessment9 papersGoogle Earth, meter stick...
measurementstandardized

SPAD chlorophyll measurement

Measurement of chlorophyll fluorescence using LI-600 to assess photosynthetic efficiency by quantifying light emission from chlorophyll molecules excited by solar radiation.

plant physiology9 papersLI-600
measurementstandardized

Nondestructive plant size measurement for biomass prediction (Asteraceae)

Systematic measurement of plant morphological characteristics (leaf number, leaf area, stalk count, etc.) before plant extraction to develop predictive relationships with total plant biomass. Differen...

morphometric8 papersmeasurement tools for length and area
measurement

Diurnal thermal videography of plant communities

Continuous infrared thermal imaging of vegetation plots at 5-second intervals from sunrise to sunset using elevated FLIR cameras to capture leaf temperature dynamics across environmental gradients.

thermal imaging4 papersA615 FLIR infrared camera, 13 mm lens...
measurement

Elevation gradient flower spectrophotometry

Systematic collection and spectrophotometric analysis of flowers across elevation gradients to quantify color variation. Targets pollinator-visible flower regions and converts reflectance to pollinato...

optical spectroscopy4 papersAvantes model 2048 spectrophotometer, coolers...
measurementstandardized

Grid-based root presence-absence quantification from soil pit photographs (Plantae)

Photographs of soil pit faces are overlaid with 1×1 cm grids to systematically score presence or absence of fine and coarse roots in each grid cell, providing depth-resolved estimates of root spatial ...

root distribution mapping4 paperscamera, measuring tapes...
measurement

GIS-based riparian proximity measurement (Picidae)

Measurement of distances from bird survey points to nearest riparian features using aerial photography, field measurements, and GIS analysis to quantify habitat proximity effects.

spatial analysis3 papersaerial photos (15 cm/pixel resolution), tape measure...
measurement

bird banding (Passerellidae)

Standard measurements of bird morphology including wing chord, tail length, tarsus length, and body condition assessment. Birds banded with color combinations and USGS bands for individual identificat...

morphological assessment3 papersthree-color darvic bands, USGS bands size 1B...
measurement

Cavity nest site characterization (Aves)

Comprehensive measurement of nest tree characteristics and landscape context including tree size, nest height, cavity orientation, and distances to key habitat features. Multi-scale habitat characteri...

habitat assessment2 paperscompass, measuring equipment for DBH...
measurement

Grid-based topographic measurement

Systematic measurement of slope and aspect at grid cell centers using compass and clinometer with clipboard to minimize micro-scale surface variation effects.

topographic survey2 paperscompass, clinometer...
measurement

Ion exchange resin strips

Mixed-bed ion-exchange resin bags deployed at 5 cm soil depth to assess NO3-N and NH4-N availability. Resins are extracted with KCl and analyzed using flow injection autoanalyzer.

biogeochemistry2 papersmixed-bed ion-exchange resin bags, nylon stockings (H-OH form, # R231-500; Fisher Scientific International Inc., Pittsburgh, PA, USA)...
measurement

Riparian willow structural complexity assessment (Parulidae)

Combined vertical (Robel pole) and horizontal (line intercept) measurements to quantify willow habitat structural complexity including height diversity, average height, patchiness, frequency and cover...

vegetation structure2 papersmodified Robel pole, 3x200-cm PVC pipe marked at 0.5 m intervals...