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Groundwater Biogeochemistry and Dissolved Organic Matter Cycling

studies how water moves through soils and sediments and the chemical reactions that occur underground, which is crucial for understanding water quality and ecosystem health.

Dataset: 72Concept: 42Protocol: 13Publication: 11Author: 10Place: 5
groundwater chemistrybiogeochemical processesdissolved organic mattersubsurface hydrologyweathering reactions

Concept (42) →

Show 32 more concepts

pH

measurementbiogeochemistry70 papers

specific conductance

measurementbiogeochemistry66 papers

porosity

measurementhydrology65 papers

concentration-discharge relationships

measurementhydrology63 papers

hydraulic connectivity

The degree to which water movement is facilitated or impeded through connected flow paths in subsurface sediments

processhydrology56 papers

transit time distributions

measurementhydrology50 papers

redox reactions

processbiogeochemistry49 papers

reactive transport

processbiogeochemistry44 papers

hypogene mineralization

Mineral formation from ascending hydrothermal solutions

processgeneral geology43 papers

aerobic respiration

processbiogeochemistry29 papers

petrogenic organic carbon

Organic carbon derived from sedimentary rocks that is often poorly quantified and influences soil organic carbon composition, age, and stability

phenomenonbiogeochemistry26 papers

reactive transport modeling

Modeling approach that couples transport processes with geochemical reactions to understand subsurface flow and chemical interactions

model typebiogeochemistry25 papers

iron redox cycling

processbiogeochemistry21 papers

metabolomes

measurementmolecular19 papers

sample treatment effects

phenomenonmethodological16 papers

DIC export

processbiogeochemistry12 papers

river networks

frameworkhydrology10 papers

scattering

measurementclimate9 papers

sorption

processbiogeochemistry5 papers

uranium mineralogy

The association of uranium with different solid-phase mineral forms that influences uranium mobility between solid and water phases

phenomenonbiogeochemistry5 papers

ecoregion

Geographic classification system used to reduce complexity and simplify presentation of continental-scale results

frameworklandscape4 papers

turnover times

measurementhydrology4 papers

depth distributions

measurementgeneral ecology3 papers

saturation index

metricbiogeochemistry3 papers

biogeographical patterns

Geographic patterns in biodiversity and chemical diversity across latitudinal and environmental gradients

phenomenonbiogeochemistry3 papers

scaling relationships

frameworkmethodological3 papers

retardation processes

processbiogeochemistry2 papers

solid-phase uranium

phenomenonbiogeochemistry2 papers

physical protection

processbiogeochemistry1 paper

carbonate

measurementbiogeochemistry1 paper

nutrient removal

processbiogeochemistry1 paper

biolability

measurementbiogeochemistry1 paper

Protocol (13) →

drive-point piezometer groundwater sampling

Systematic collection of groundwater samples at regular depth intervals using sediment coring and peristaltic pumping, with immediate field analysis a...

samplingstandardized113 papers

standard water chemistry analysis suite

Standard analytical chemistry methods using ion chromatography for anions and inductively coupled plasma mass spectrometry for cations and trace eleme...

analyticalstandardized46 papers

TOC analysis

Comprehensive chemical analysis of water samples including major ions, trace metals, and conservative tracers using multiple analytical techniques. In...

analyticalstandardized42 papers

Fourier Transform Ion Cyclotron Resonance Mass Spectrometry

High-resolution mass spectrometry analysis using Fourier Transform Ion Cyclotron Resonance to characterize the molecular composition of organic matter...

analyticalstandardized36 papers

Stepped-temperature elemental analysis

Stepped-temperature thermal analysis to quantify readily oxidizable organic carbon (OC400), total inorganic carbon (TIC), and residual organic carbon ...

analytical22 papers

Solid Phase Extraction

Sample pre-treatment method using PPL cartridges (Bond Elut) after acidifying samples to pH 2 with phosphoric acid to extract organic compounds.

analytical19 papers

SEM-EDS microanalysis

Quantitative XRD analysis of powdered rock samples using Rietveld refinement to determine mineral concentrations and spatial distribution. Samples ana...

analyticalstandardized14 papers

Ferrozine method for iron determination

Colorimetric determination of ferrous iron concentrations using ferrozine reagent with spectrophotometric measurement at 562 nm absorption peak and ca...

analytical10 papers

Sterivex filtration

Samples filtered through 0.22 μm Sterivex filters with housings made of Eastar co-polyester.

sampling5 papers

Methylene blue spectrophotometry

Dissolved sulfide concentration determined by reacting H2S with N,N-dimethyl-p-phenylene diamine under acidic conditions to form methylene blue.

analytical5 papers
Show 3 more protocols

Publication (11) →

Seasonal Manganese Transport in the Hyporheic Zone of a Snowmelt-Dominated River (East River, Colorado)

2020Hydrogeology Journalarticle

Quantifying Subsurface Flow and Solute Transport in a Snowmelt-Recharged Hillslope With Multiyear Water Balance

2022Water Resources Researcharticle

Molecular diversity of dissolved organic matter reflects macroecological patterns in river networks

2025Scientific Reportsarticle

Seasonal manganese transport in the hyporheic zone of a snowmelt-dominated river (East River, Colorado)

2019thesis

A molecular investigation of soil organic carbon composition across a subalpine catchment

2018Soil Systemsarticle

Single-Well Push–Pull Tracer Test Analyses to Determine Aquifer Reactive Transport Parameters at a Former Uranium Mill Site (Grand Junction, Colorado)

2023Mineralsarticle

Column-Test Data Analyses and Geochemical Modeling to Determine Uranium Reactive Transport Parameters at a Former Uranium Mill Site (Grand Junction, Colorado)

2022Mineralsarticle

Relationships between CO2, thermodynamic limits on silicate weathering, and the strength of the silicate weathering feedback

2018Earth and Planetary Science Lettersarticle

Using Fission-Track Radiography Coupled with Scanning Electron Microscopy for Efficient Identification of Solid-Phase Uranium Mineralogy at a Former Uranium Pilot Mill (Grand Junction, Colorado)

2021Geosciencesarticle

Quantifying the effect of petrogenic carbon on SOC turnover for two Rocky Mountain soils: when are petrogenic carbon corrections required?

2025Journal of Geophysical Research: Biogeosciencesarticle
Show 1 more publications

Dataset (72) →

East River Pore Water FTICR-MS Data associated with "Geomorphic and Hydrogeochemical Controls on Fine-Scale Hyporheic Microbiome Assembly and Function"

Pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of 2018. This d...

other2025

2016 Floodplain Geochemistry from the East River Watershed, Colorado

This dataset includes groundwater geochemistry data from floodplain piezometers collected as a part of the Watershed Function Scientific Focus Area (S...

ess_dive2023

Depth-resolved seasonal porewater chemistry measurements from 3 locations around Meander A of the East River, Colorado

Depth-resolved pore water samples were recovered from 3 locations around Meander A in the East River near Crested Butte, CO, USA for a suite of physio...

ess_dive2021

Kinetics Data of Iron(II), Manganese(II), Dissolved Organic Carbon and Nitrate from Batch Incubation Experiments Using Hyporheic Sediments from the East River Watershed, Colorado.

Hyporheic zones act as critical ecological links between terrestrial and aquatic systems where redox-sensitive metals of iron (Fe) and manganese (Mn) ...

ess_dive2020

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

2019 Meander C and Meander Z floodplain groundwater chemistry from the East River Watershed, CO, USA

This dataset includes groundwater geochemistry data from floodplain piezometers collected as a part of the Watershed Function Scientific Focus Area (S...

ess_dive2025

In-situ electrochemical and water quality data; Slate River and East River floodplains, Crested Butte, CO; May 2022-September 2022.

This data package includes a time-series of field measurements from May to September 2022 in groundwater and surface water from the Slate River and Ea...

other2023

Surface Water Disinfection Byproducts and Organic Matter Characterization Data Associated with: “Disinfection byproducts formed during drinking water treatment reveal an export control point for dissolved organic matter in a subalpine headwater stream”

This dataset is associated with the publication “Disinfection byproducts formed during drinking water treatment reveal an export control point f...

other2025

Surface Water Quality Data from Beaver-Impacted Streams; Trail Creek and East River, Colorado 2025

This data package contains surface water chemistry measurements collected in 2025 to evaluate how beaver damming and low-tech process-based stream res...

ess_dive2026

Data from Stewart et al. 2026 "Organic Colloid Composition in Variable-Redox Porewaters within a Mountainous Floodplain"

Redox gradients, often driven by changes in sediment moisture levels in porous, heterogeneous groundwater systems, create dynamic conditions that may ...

ess_dive2026
Show 62 more datasets

Foliar element determination from field survey in association with the National Ecological Observatory Network Airborne Observation Platform survey, East River, Colorado 2018

The purpose of this dataset is to support research aimed at understanding the coupling between hydrologic and biogeochemical processes at watershed sc...

ess_dive2025

2017 Meander C and O floodplain groundwater chemistry from the East River, Colorado.

This dataset includes groundwater geochemistry data from floodplain piezometers collected as a part of the Watershed Function Scientific Focus Area (S...

other2023

Total metal, carbon, anion, iron speciation, and sulfide concentrations; Slate River, East River, and Trail Creek surface water and floodplains, Crested Butte, CO; May 2023–August 2023

This data package comprises analytical results and metadata from stream and groundwater samples collected from the Slate River, East River, Trail Cree...

ess_dive2024

WHONDRS Summer 2019 Sampling Campaign: Global River Corridor Sediment FTICR-MS, Dissolved Organic Carbon, Aerobic Respiration, Elemental Composition, Grain Size, Total Nitrogen and Organic Carbon Content, Bacterial Abundance, and Stable Isotopes (v9)

[object Object]

2020

Specific conductivity, pH, dissolved oxygen, water temperature, alkalinity and sulfide in-situ data; Slate River floodplain, Crested Butte, CO; May 2020-October 2020

This data package includes a time-series of field measurements from May to October 2020 in groundwater and surface water from the Slate River floodpla...

other2021

Kinetics Data of Iron(II), Manganese(II), Dissolved Organic Carbon and Nitrate from Batch Incubation Experiments Using Hyporheic Sediments from the East River Watershed, Colorado.

Hyporheic zones act as critical ecological links between terrestrial and aquatic systems where redox-sensitive metals of iron (Fe) and manganese (Mn) ...

ess_dive2020

Total metals, carbon, nitrogen & anion concentration data; Slate River & East River floodplains, Crested Butte, CO; May 2022-October 2022

This data package includes processed and undiluted measurements for metal, total carbon, total nitrogen, and anion concentrations from pore water (gro...

ess_dive2023

Bulk density, grain size, carbon, and nitrogen content of floodplain fine sediment along the East River, Colorado collected from 2014 to 2017

The dataset is comprised of grain size, bulk density, carbon and nitrogen content of soils sampled on the floodplain of the East River 4 to 11 km down...

other2025

Total metals & anion concentration data; Slate River floodplain, Crested Butte, CO; May 2020-September 2020

This data package includes processed and undiluted measurements for metal and anion concentrations from pore water (groundwater) samples from the Slat...

other2021

Kinetics Data of Iron(II), Manganese(II), Dissolved Organic Carbon and Nitrate from Batch Incubation Experiments Using Hyporheic Sediments from the East River Watershed, Colorado.

Hyporheic zones act as critical ecological links between terrestrial and aquatic systems where redox-sensitive metals of iron (Fe) and manganese (Mn) ...

ess_dive2020

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

Rhizosphere Soil Biogeochemical Data and Photosynthetic Data of Vicia Faba in a Rhizobox

Here we share the data in column format via csv files for pH, redox, and dissolved oxygen collected at hourly resolution from microelectrodes. Dissolv...

other2025

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

Total metal, carbon, anion, iron speciation, and sulfide concentrations; Slate River, East River, and Trail Creek surface water and floodplains, Crested Butte, CO; May 2023–August 2023

This data package comprises analytical results and metadata from stream and groundwater samples collected from the Slate River, East River, Trail Cree...

ess_dive2024

Total metal, carbon, anion, iron speciation, and sulfide concentrations; Slate River, East River, and Trail Creek surface water and floodplains, Crested Butte, CO; May 2023–August 2023

This data package comprises analytical results and metadata from stream and groundwater samples collected from the Slate River, East River, Trail Cree...

ess_dive2024

Total metal, carbon, anion, iron speciation, and sulfide concentrations; Slate River, East River, and Trail Creek surface water and floodplains, Crested Butte, CO; May 2023–August 2023

This data package comprises analytical results and metadata from stream and groundwater samples collected from the Slate River, East River, Trail Cree...

ess_dive2024

Total metal, carbon, anion, iron speciation, and sulfide concentrations; Slate River, East River, and Trail Creek surface water and floodplains, Crested Butte, CO; May 2023–August 2023

This data package comprises analytical results and metadata from stream and groundwater samples collected from the Slate River, East River, Trail Cree...

ess_dive2024

Specific conductivity, pH, dissolved oxygen, water temperature and alkalinity in-situ data; Slate River floodplain, Crested Butte, CO; March 2021-October 2021.

This data package includes a time-series of field measurements from March to October 2021 in groundwater and surface water from the Slate River floodp...

ess_dive2023

Data from: “Significant stream chemistry response to temperature variations in a high-elevation mountain watershed”

High-elevation mountain regions, central to global freshwater supply, are experiencing more rapid warming than low-elevation locations. High-elevation...

ess_dive2023

Waterlevel, geochemical, and borehole data from Rifle, Colorado from 2006-2016

The files included in this data package provide site wide water level data, geochemical data, and borehole information associated with the Rifle site ...

ess_dive2021

Waterlevel, geochemical, and borehole data from Rifle, Colorado from 2006-2016

The files included in this data package provide site wide water level data, geochemical data, and borehole information associated with the Rifle site ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

Inverted resistivity and IP models

This data release consists of 1,984 line-kilometers of airborne electromagnetic (AEM), magnetic data and radiometric data collected from October to No...

other2021

Minimally processed AEM, magnetic and radiometric data

This data release consists of 1,984 line-kilometers of airborne electromagnetic (AEM), magnetic data and radiometric data collected from October to No...

other2021

Processed AEM data

This data release consists of 1,984 line-kilometers of airborne electromagnetic (AEM), magnetic data and radiometric data collected from October to No...

other2021

DWCZ - CO - Coal Creek - Soil Collection ICP - (DWCZ-MEF-CC-SoilSample-Transect-AWinkler) - (2022-2023)

Locations: Coal Creek, which serves as the drinking water source for the town of Crested Butte, CO, receives both acid mine and acid rock drainage as ...

other0

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

East River Surface and Pore Water FTICR-MS Data Associated with “Implications of sample treatment on characterization of the riverine environmental metabolome”

Surface and pore water samples were collected from distributed locations around Meander A in East River (Crested Butte, CO, USA) during the summer of ...

ess_dive2021

Total metals, sulfur and organic carbon data; Slate River floodplain, Crested Butte, CO; March 2021-October 2021

This data package includes processed and undiluted measurements for metal, sulfur and organic carbon concentrations from pore water (groundwater) samp...

ess_dive2023

Data and scripts associated with “Riverine dissolved organic matter transformations increase with watershed area, water residence time, and Damköhler numbers in nested watersheds” (v2)

This data package is associated with the publication “Riverine dissolved organic matter transformations increase with watershed area, water resi...

other2025

Aerobic respiration controls on shale weathering, Geochimica et Cosmochimica Acta, 2023: Dataset

This data package was generated in order to support the development of a deep-time weathering model and to assess the coupling between shale weatherin...

ess_dive2023

Aerobic respiration controls on shale weathering, Geochimica et Cosmochimica Acta, 2023: Dataset

This data package was generated in order to support the development of a deep-time weathering model and to assess the coupling between shale weatherin...

ess_dive2023

Geochemistry of East River, Colorado floodplain sediments from Meander Z and Meander Y collected in 2017.

This dataset includes sediment geochemical characterization data from floodplain sediments collected as a part of the Watershed Function Scientific Fo...

other2023

WHONDRS Surface Water Dissolved Organic Carbon and FTICR-MS across Stream Orders in Four United States Watersheds in 2019 and 2020.

This dataset supports the broader Watershed Rules of Life (WROL) study examining spatial and temporal biogeochemical and microbial relationships acros...

ess_dive2023

Dataset for Quantifying Dissolved Organic Matter Scaling Relationships and Trends in Watersheds

[object Object]

2024

Upper Colorado River Basin: Monitoring sites and water chemistry data used to develop a specific conductance - salinity proxy model

Salinity levels in streams and tributaries of the Colorado River Basin have been a major concern for years. Recently, the United States Geological Sur...

other2024

Laboratory Optical Measurements Collected for Surface Water Samples Collected within Fraser River in the Upper Colorado River Basin from September 2021 through August 2023

Optical spectra reported here are collected from 17 surface water sampling sites within the Fraser River, a headwaters drainage of the Upper Colorado ...

other2024

Total dissolved-solid loads in the Upper Colorado River Basin during high-flow hydrologic events from 2021 to 2023

This U.S. Geological Survey (USGS) data release contains data that allows for calculation of total dissolved-solid loads for high-flow and baseflow co...

other2026

Foliar element determination from field survey in association with an Analytical Spectral Device Fieldspec3 survey, East River, CO 2023

Foliar elements were determined for samples collected in the field during a 2023 survey in Gunnison County, CO that also included paired data collecti...

other2025

Geochemistry and Environmental Tracer Data for Groundwater, Stream Water, and Sediment from the East Mancos River, Colorado, 2023

This U.S. Geological Survey (USGS) data release contains data from stream water, groundwater, and stream sediment samples collected in August 2023 in ...

other2025

Whole rock major, minor, and trace element geochemistry of the upper part of the Mount Emmons-Redwell porphyry molybdenum (Climax-type) deposit, Redwell Basin, Crested Butte, Colorado

This U.S. Geological Survey (USGS) data release provides whole rock major, minor, and trace element geochemical data from the fluorine-rich Mount Emmo...

other2022

WHONDRS Surface Water Sampling for Metabolite Biogeography (Geochemistry and Aligned FTICR-MS).

This dataset is from an ongoing global survey of surface water metabolites to provide understanding of the character of organic matter that may be del...

ess_dive2021

Total dissolved-solid loads in the Upper Colorado River Basin during high-flow hydrologic events from 2021 to 2023

This U.S. Geological Survey (USGS) data release contains data that allows for calculation of total dissolved-solid loads for high-flow and baseflow co...

other2026

Lead isotopic compositions of airborne particulates collected from snow and from dry deposition in the East River Watershed, Colorado and at the Southern Sierra Critical Zone Observatory, California.

The data set consists of lead (Pb) isotopic ratios (206Pb/207Pb and 208Pb/207Pb, as well as 206Pb/204Pb, 207Pb/204Pb, 208Pb/204Pb) for particulate sam...

other2023

Soil bulk density and texture data collected during field survey associated with NEON AOP survey, East River, CO 2018.

The purpose of soil core sampling was to determine soil bulk density, volumetric water content, and soil texture across the sites that were sampled in...

ess_dive2021

DWCZ - CO - Coal Creek - Soil Collection ICP - (DWCZ-MEF-CC-SoilSample-Transect-AWinkler) - (2022-2023)

Locations: Coal Creek, which serves as the drinking water source for the town of Crested Butte, CO, receives both acid mine and acid rock drainage as ...

other0

Digital Data from Mineral Investigation of Sangre de Cristo Wilderness Study Area, Alamosa, Custer, Fremont, Huerfano, and Saguache Counties, Colorado, USA

This Data Release provides tabular and geospatial data digitized by the U.S. Geological Survey (USGS) from a U.S. Bureau of Mines (USBoM) report title...

other2021

Petrogenic organic carbon estimates for two Rocky Mountain soils underlain by Cretaceous Mancos Shale

[object Object]

2025

Electrical Resistivity Tomography (ERT) Data

Surface geophysical surveys were conducted from 2016 to 2018 in the greater East River Watershed near Crested Butte Colorado with a focused effort in ...

other2022

LAS Digital logs for the Mancos Shale, Candy Lane 1 (CL-1) Core in Montrose County, Colorado

The Candy Lane 1 (CL-1) core was acquired in November 2005 as part of a multidisciplinary effort by the U.S. Geological Survey, the Bureau of Land Man...

other2022

Supplemental Data for "Using Fission-Track Radiography Coupled with Scanning Electron Microscopy for Efficient Identification of Solid-Phase Uranium Mineralogy at a Former Uranium Pilot Mill (Grand Junction, Colorado)"

[object Object]

2021