Genetic bottleneck simulation and detection (Sciuridae)

Subcategory: population genetics modeling

Standard reference: Kuo and Janzen (2003)

Papers: 1 | Mentions: 1

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Description

Computer simulation of population genetic changes during bottlenecks using BOTTLESIM software combined with multiple analytical approaches to detect bottleneck signatures.

Typical Equipment

BOTTLESIM software
BOTTLENECK software
FSTAT software
GENEPOP software
HP-RARE software

Output Measurements

M-ratios
heterozygote excess
allelic diversity changes
bottleneck detection probability

Papers Using This Protocol (1)

article

Bottlenecks and rescue effects in a fluctuating population of golden-mantled ground squirrels (<i>Spermophilus lateralis</i>)

2011Conservation Geneticsusing