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mitochondrial DNA barcoding (Drosophilidae)

Subcategory: phylogenetics
Standard reference: Liu & Beckenbach 1992; Simon et al. 1994; de Brito et al. 2002
Papers: 4 | Mentions: 4

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Description

Time-calibrated phylogenetic analysis using multiple genes and both maximum likelihood and Bayesian approaches to estimate evolutionary relationships and timing of trait evolution.

Typical Equipment

  • RAxML software
  • MrBayes software
  • BEAST v2.4.6 software

Output Measurements

  • phylogenetic trees
  • divergence times
  • ancestral state reconstructions

Papers Using This Protocol (4)

article

Evolution and genomic basis of the plant penetrating ovipositor: a key morphological trait in herbivorous Drosophilidae

2022Proceedings of the Royal Society Busing
article

Genes involved in the evolution of herbivory by a leaf-mining drosophilid fly

2012Genome Biology and Evolutionusing
article

Mining the plant-insect interface with a leafmining <i>Drosophila</i> of <i>Arabidopsis</i>

2011Molecular Ecologyintroducing
article

Phylogeographic patterns in <i>Drosophila montana</i>

2007Molecular Ecologyusing