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Mantel test
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Description
Calculation of multiple phylogenetic diversity metrics for plant communities using established phylogenetic trees and null model approaches to test for phylogenetic clustering or overdispersion.
Typical Equipment
- R software
- picante package
- ALLMB.tre phylogeny file
Output Measurements
- Faith's phylogenetic diversity
- mean phylogenetic distance
- mean nearest taxon distance
- standardized effect sizes
Papers Using This Protocol (11)
article
Rare species do not disproportionately contribute to phylogenetic diversity in a subalpine plant community
article
Rare species do not disproportionately contribute to phylogenetic diversity in a subalpine plant community
article
Climate and multiple dimensions of plant diversity regulate ecosystem carbon exchange along an elevational gradient
student_paper
The effects of drought on subalpine floral community diversity
student_paper
Effects of Plant Diversity on Selection for Insect Resistance Traits in <i>Boechera stricta</i>
student_paper
Plant Successional Changes Over 67 Years on the Gothic Earthflow.
student_paper
Competitive hierarchy or niche packing? An examination of the effects of competition on community.
student_paper
Measuring the influence of phylogenetic relationships on floral visitation
student_paper
"With a little help from my friends": Phylogenetic distance as a predictor of floral visitation in the plant communities of Gothic, CO.
student_paper
Species richness along an elevational gradient
student_paper