ITS phylogenetic reconstruction (Orobanchaceae)

Subcategory: phylogenetics

Papers: 1 | Mentions: 1

Local Knowledge Graph (12 entities)

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Description

Standard molecular phylogenetic approach using ITS sequences to reconstruct evolutionary relationships and calculate phylogenetic distances between plant species. Includes sequence alignment, tree inference, and time calibration.

Typical Equipment

R software
msa package
seqinr package
ape package

Output Measurements

phylogenetic distance
evolutionary relationships

Papers Using This Protocol (1)

article

Phylogeny does not predict the outcome of heterospecific pollen–pistil interactions in a species-rich alpine plant community

2025American Journal of Botanyusing