← Back to Conceptsmeasurement

metagenome-assembled genome

Scope: molecular

Papers: 23 | Mentions: 59

Local Knowledge Graph (41 entities)

Loading graph...

Definition

Genomic bins reconstructed from metagenomic sequencing data representing individual microbial taxa

Related Terms (7)

MAGMAGsviromicsmetagenomicmicrobial DNAviral DNA sequencingbacterial community structure

Publications (34)

article

Metagenome-assembled genomes for oligotrophic nitrifiers From a mountainous gravelbed floodplain

2025Environmental Microbiologycentral

article

Metagenome-assembled genomes for oligotrophic nitrifiers From a mountainous gravelbed floodplain

2025Environmental Microbiologymeasured

article

Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome

2025Microbiomecentral

article

Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome

2025Microbiomemeasured

article

Molecular diversity of dissolved organic matter reflects macroecological patterns in river networks

2025Scientific Reportscontext

article

Molecular diversity of dissolved organic matter reflects macroecological patterns in river networks

2025Scientific Reportsmeasured variable

article

Molecular diversity of dissolved organic matter reflects macroecological patterns in river networks

2025Scientific Reportsprimary focus

article

Show 24 more publications

article

Integrating natural gradients, experiments, and statistical modeling in a distributed network experiment: An example from the WaRM Network

2022Ecology and Evolutionmeasured variable

article

Borgs are giant genetic elements with potential to expand metabolic capacity

2022Natureframework

article

Diverse cressdnaviruses and an anellovirus identified in the fecal samples of yellow-bellied marmots

2021Virologyframework

thesis

From tree to tap: The impacts of climate change on biogeochemical processes during conifer needle distribution and broader implications for water quality in Colorado

2021measured variable

article

Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale

2021Microbiomeframework

article

Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale

2021Microbiomemeasured

article

Do microorganisms obey macroecological rules?

2021Authoreameasured variable

article

Do microorganisms obey macroecological rules?

2021Authoreaprimary focus

article

The Colorado East River Community Observatory Data Collection

2021Hydrologic Processesmeasured variable

article

The East River Community Observatory Data Collection: Diverse, multiscale data from a mountainous watershed in the East River, Colorado

2020Authoreameasured variable

article

Hyporheic Zone Microbiome Assembly Is Linked to Dynamic Water Mixing Patterns in Snowmelt-Dominated Headwater Catchments

2019Journal of Geophysical Research: Biogeosciencesmeasured

article

Heterogeneity in Hyporheic Flow, Pore Water Chemistry, and Microbial Community Composition in an Alpine Streambed

2019JGR: Biogeosciencescentral

article

Microbial communities across a hillslope-riparian transect shaped by proximity to the stream, groundwater table, and weathered bedrock

2019Ecology and Evolutionprimary focus

article

Microbial communities across a hillslope-riparian transect shaped by proximity to the stream, groundwater table, and weathered bedrock

2019Ecology and Evolutionmeasured variable

article

Microbial communities across a hillslope-riparian transect shaped by proximity to the stream, groundwater table, and weathered bedrock

2019Ecology and Evolutionmeasured

article

Microbial communities across a hillslope-riparian transect shaped by proximity to the stream, groundwater table, and weathered bedrock

2019Ecology and Evolutionframework

article

The East River, Colorado, Watershed: A mountainous community testbed for improving predictive understanding of multiscale hydrological-biogeochemical dynamics

2018Vadose Zone Journalmeasured variable

thesis

Host-parasite ecology of <i>Baetis bicaudatus</i> mayflies and <i>Gasteromermis sp.</i> nematodes in high-altitude streams

2018measured variable

thesis

Biotic and abiotic drivers of plant symbionts determine plant performance, the maintenance of diversity, and response to global change

2017primary focus

thesis

Biotic and abiotic drivers of plant symbionts determine plant performance, the maintenance of diversity, and response to global change

2017context

thesis

Biotic and abiotic drivers of plant symbionts determine plant performance, the maintenance of diversity, and response to global change

2017measured variable

article

Using geochemical indicators to distinguish high biogeochemical activitiy in floodplain soils and sediments

2016Sci Total Environcentral

thesis

The structure and function of subalpine ecosystems in the face of climate change

2012measured variable

thesis

Ecosystem responses to warming-induced plant species loss and increased nitrogen availability in a Rocky Mountain subalpine meadow

2006measured variable

Related Concepts (10)

biogeochemical reactions

process32 shared papers

nitrogen retention

process22 shared papers

carbon cycling

process19 shared papers

elevation gradient

phenomenon18 shared papers

dissolved organic matter

measurement16 shared papers

nitrogen pollution

phenomenon16 shared papers

leaf water content

measurement16 shared papers

climate change

phenomenon16 shared papers

species abundance

metric15 shared papers

soil pH

measurement14 shared papers

Frequently Associated Species

Pseudomonas fluorescens

Pseudomonadaceae7 papers

Thaumarchaeota

4 papers

Shewanella oneidensis

4 papers

Geobacter spp.

4 papers

Festuca thurberi

Poaceae4 papers

Helianthella quinquenervis

Asteraceae4 papers

Nitrososphaera sp.

4 papers

Juncus drummondii

Juncaceae4 papers

Desulfobacca acetoxidans

Syntrophaceae4 papers

Desulfuromonas sp.

4 papers

metagenome-assembled genome

Local Knowledge Graph (41 entities)

Definition

Related Terms (7)

Publications (34)

Metagenome-assembled genomes for oligotrophic nitrifiers From a mountainous gravelbed floodplain

Metagenome-assembled genomes for oligotrophic nitrifiers From a mountainous gravelbed floodplain

Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome

Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome

Molecular diversity of dissolved organic matter reflects macroecological patterns in river networks

Molecular diversity of dissolved organic matter reflects macroecological patterns in river networks

Molecular diversity of dissolved organic matter reflects macroecological patterns in river networks

BASIN-3D: A brokering framework to integrate diverse environmental data

Microvirus Genomes Identified in Fecal Samples from Yellow - Bellied Marmots

Winters are changing: snow effects on Arctic and alpine tundra ecosystems

Integrating natural gradients, experiments, and statistical modeling in a distributed network experiment: An example from the WaRM Network

Borgs are giant genetic elements with potential to expand metabolic capacity

Diverse cressdnaviruses and an anellovirus identified in the fecal samples of yellow-bellied marmots

From tree to tap: The impacts of climate change on biogeochemical processes during conifer needle distribution and broader implications for water quality in Colorado

Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale

Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale

Do microorganisms obey macroecological rules?

Do microorganisms obey macroecological rules?

The Colorado East River Community Observatory Data Collection

The East River Community Observatory Data Collection: Diverse, multiscale data from a mountainous watershed in the East River, Colorado

Hyporheic Zone Microbiome Assembly Is Linked to Dynamic Water Mixing Patterns in Snowmelt-Dominated Headwater Catchments

Heterogeneity in Hyporheic Flow, Pore Water Chemistry, and Microbial Community Composition in an Alpine Streambed

Microbial communities across a hillslope-riparian transect shaped by proximity to the stream, groundwater table, and weathered bedrock

Microbial communities across a hillslope-riparian transect shaped by proximity to the stream, groundwater table, and weathered bedrock

Microbial communities across a hillslope-riparian transect shaped by proximity to the stream, groundwater table, and weathered bedrock

Microbial communities across a hillslope-riparian transect shaped by proximity to the stream, groundwater table, and weathered bedrock

The East River, Colorado, Watershed: A mountainous community testbed for improving predictive understanding of multiscale hydrological-biogeochemical dynamics

Host-parasite ecology of <i>Baetis bicaudatus</i> mayflies and <i>Gasteromermis sp.</i> nematodes in high-altitude streams

Biotic and abiotic drivers of plant symbionts determine plant performance, the maintenance of diversity, and response to global change

Biotic and abiotic drivers of plant symbionts determine plant performance, the maintenance of diversity, and response to global change

Biotic and abiotic drivers of plant symbionts determine plant performance, the maintenance of diversity, and response to global change

Using geochemical indicators to distinguish high biogeochemical activitiy in floodplain soils and sediments

The structure and function of subalpine ecosystems in the face of climate change

Ecosystem responses to warming-induced plant species loss and increased nitrogen availability in a Rocky Mountain subalpine meadow

Related Concepts (10)

biogeochemical reactions

nitrogen retention

carbon cycling

elevation gradient

dissolved organic matter

nitrogen pollution

leaf water content

climate change

species abundance

soil pH

Frequently Associated Species

Pseudomonas fluorescens

Thaumarchaeota

Shewanella oneidensis

Geobacter spp.

Festuca thurberi

Helianthella quinquenervis

Nitrososphaera sp.

Juncus drummondii

Desulfobacca acetoxidans

Desulfuromonas sp.